454 Sequencing of a Fragment library - SRA

SRX005568: 454 Sequencing of a Fragment library
1 LS454 (454 GS FLX Titanium) run: 11,784 spots, 5.3M bases, 12.7Mb downloads

UUID: 46af1010-6432-486f-b678-598bfd53acc4

Design: 454 sequencing of Streptomyces himastatinicus ATCC 53653 via random selection

Submitted by: Broad Institute (BI)

Study: Soil isolate from India

PRJNA33605 • SRP000839 • All experiments • All runs

show Abstracthide Abstract

Streptomyces hygroscopicus ATCC 53653. Streptomyces hygroscopicus ATCC 53653 was isolated from soil in India and produces the antitumor agent himastatin. The genome sequence of this organism will provide information on the production and regulation of this and other potentially useful compounds.

Sample: Generic sample from Streptomyces himastatinicus ATCC 53653

SAMN00103064 • SRS003233 • All experiments • All runs

Organism: Streptomyces himastatinicus ATCC 53653

Library:

Name: 454-2516

Instrument: 454 GS FLX Titanium

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Spot descriptor:

barcode

Group tag	Basecalls
Maseru	TTCTTGAC

13 forward

Experiment attributes: (show all 6 attributes...) (hide...)

analysis_type: Assembly

gssr_id: 16530.4

lsid: BROAD:SEQUENCING_SAMPLE:16530.4

material_type: Genomic DNA

project: G1216

work_request: 18629

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2009-04-12 21:53:39.0	454BaseCaller	2.0.00.22

Runs: 1 run, 11,784 spots, 5.3M bases, 12.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR139011	11,784	5.3M	12.7Mb	2011-03-27

ID:: 5827

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity